Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 CICP13-201ENST00000422015 2789 ntBASIC14.36□□□□□ -0.11
HLA-DOBP13765 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 AC243562.2-201ENST00000561247 970 ntBASIC14.36□□□□□ -0.11
HLA-DOBP13765 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DOBP13765 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DOBP13765 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 AC254562.1-201ENST00000417586 456 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 RPS8P6-201ENST00000426177 609 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 CNN2P11-201ENST00000429351 262 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 SPDYE14P-201ENST00000442619 822 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 AP006288.1-201ENST00000446065 395 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 AC004967.1-201ENST00000453589 447 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 AC023141.5-201ENST00000458585 616 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 AC009093.7-201ENST00000623853 1223 ntBASIC14.35□□□□□ -0.11
HLA-DOBP13765 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DOBP13765 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DOBP13765 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms