Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 FO393414.2-201ENST00000405153 598 ntBASIC18.79■□□□□ 0.6
TOP1P11387 HIST3H2BA-201ENST00000436555 524 ntBASIC18.79■□□□□ 0.6
TOP1P11387 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.79■□□□□ 0.6
TOP1P11387 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.79■□□□□ 0.6
TOP1P11387 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.79■□□□□ 0.6
TOP1P11387 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.79■□□□□ 0.6
TOP1P11387 LINC02560-201ENST00000596379 459 ntBASIC18.79■□□□□ 0.6
TOP1P11387 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.79■□□□□ 0.6
TOP1P11387 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TOP1P11387 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.78■□□□□ 0.6
TOP1P11387 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP1P11387 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TOP1P11387 AP001282.1-201ENST00000531301 1499 ntBASIC18.78■□□□□ 0.6
TOP1P11387 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.78■□□□□ 0.6
TOP1P11387 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.78■□□□□ 0.6
TOP1P11387 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 MTHFR-217ENST00000641820 1569 ntBASIC18.78■□□□□ 0.6
TOP1P11387 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.78■□□□□ 0.6
TOP1P11387 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP1P11387 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 EEF1DP4-201ENST00000446006 880 ntBASIC18.78■□□□□ 0.6
TOP1P11387 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP1P11387 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP1P11387 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP1P11387 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP1P11387 AC008761.3-201ENST00000624803 892 ntBASIC18.78■□□□□ 0.6
TOP1P11387 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.78■□□□□ 0.6
TOP1P11387 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP1P11387 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.78■□□□□ 0.6
TOP1P11387 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.78■□□□□ 0.6
TOP1P11387 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP1P11387 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TOP1P11387 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP1P11387 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP1P11387 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TOP1P11387 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.77■□□□□ 0.6
TOP1P11387 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP1P11387 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 BNIP3P1-202ENST00000550043 1585 ntBASIC18.77■□□□□ 0.6
TOP1P11387 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP1P11387 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 MIR648-201ENST00000385046 94 ntBASIC18.77■□□□□ 0.6
TOP1P11387 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.77■□□□□ 0.6
TOP1P11387 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP1P11387 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP1P11387 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.77■□□□□ 0.6
TOP1P11387 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.77■□□□□ 0.6
TOP1P11387 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms