Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CSB-PGBD3P0DP91 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSB-PGBD3P0DP91 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.02■□□□□ 0.95
CSB-PGBD3P0DP91 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 MIR326-201ENST00000362220 95 ntBASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 HNRNPUP1-201ENST00000554987 333 ntBASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 GNRHR2-203ENST00000581100 1187 ntBASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 AP001094.4-201ENST00000579008 2176 ntBASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSB-PGBD3P0DP91 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 AL645608.8-201ENST00000606034 2086 ntBASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 AL121723.1-201ENST00000445194 1519 ntBASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 DUX4L45-201ENST00000566406 1057 ntBASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 AC005052.1-201ENST00000625181 2492 ntBASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 AP001282.1-201ENST00000531301 1499 ntBASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CSB-PGBD3P0DP91 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 AC004945.1-201ENST00000416738 983 ntBASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 AC136604.1-201ENST00000418535 575 ntBASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 KRT18P43-201ENST00000469825 1281 ntBASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 AC022137.2-201ENST00000503482 481 ntBASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 AP001582.1-201ENST00000525856 295 ntBASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 AC023310.1-201ENST00000554836 735 ntBASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.99■□□□□ 0.95
CSB-PGBD3P0DP91 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms