Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 RARRES2P8-201ENST00000566335 367 ntBASIC17.37■□□□□ 0.37
CCDC172P0C7W6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 AKAP8P1-201ENST00000434743 1349 ntBASIC17.37■□□□□ 0.37
CCDC172P0C7W6 AC144831.1-201ENST00000573312 2656 ntBASIC17.37■□□□□ 0.37
CCDC172P0C7W6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 AC092384.3-202ENST00000564646 2873 ntBASIC17.37■□□□□ 0.37
CCDC172P0C7W6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC172P0C7W6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AL590627.1-203ENST00000421194 1026 ntBASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AC073389.1-201ENST00000595595 795 ntBASIC17.36■□□□□ 0.37
CCDC172P0C7W6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AC027601.4-201ENST00000611259 610 ntBASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 FAM45BP-202ENST00000592932 1624 ntBASIC17.36■□□□□ 0.37
CCDC172P0C7W6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC172P0C7W6 AC022532.1-201ENST00000624563 1728 ntBASIC17.35■□□□□ 0.37
CCDC172P0C7W6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms