Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AP001005.1-201ENST00000571755 1248 ntBASIC15.57■□□□□ 0.08
LINGO3P0C6S8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 AL049840.3-201ENST00000602669 611 ntBASIC15.57■□□□□ 0.08
LINGO3P0C6S8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 HLA-A-201ENST00000376802 1334 ntBASIC15.57■□□□□ 0.08
LINGO3P0C6S8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 AC063926.3-201ENST00000624734 5658 ntBASIC15.57■□□□□ 0.08
LINGO3P0C6S8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINGO3P0C6S8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.56■□□□□ 0.08
LINGO3P0C6S8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 PTCHD3P3-201ENST00000403073 906 ntBASIC15.56■□□□□ 0.08
LINGO3P0C6S8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 AC136632.2-201ENST00000512891 861 ntBASIC15.56■□□□□ 0.08
LINGO3P0C6S8 TERC-201ENST00000602385 541 ntBASIC15.56■□□□□ 0.08
LINGO3P0C6S8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 AL805961.1-202ENST00000641562 540 ntBASIC15.56■□□□□ 0.08
LINGO3P0C6S8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 AC006449.6-201ENST00000612330 2296 ntBASIC15.56■□□□□ 0.08
LINGO3P0C6S8 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINGO3P0C6S8 FLJ16779-201ENST00000612722 7638 ntBASIC15.56■□□□□ 0.08
LINGO3P0C6S8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 AP002414.3-201ENST00000589352 1468 ntBASIC15.55■□□□□ 0.08
LINGO3P0C6S8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 AL356488.2-201ENST00000602755 427 ntBASIC15.55■□□□□ 0.08
LINGO3P0C6S8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINGO3P0C6S8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms