Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 AC018695.7-201ENST00000624587 2492 ntBASIC9.72□□□□□ -0.85
APOBP04114 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 NPPA-201ENST00000376476 728 ntTSL 3 BASIC9.72□□□□□ -0.85
APOBP04114 GHSR-202ENST00000427970 912 ntBASIC9.72□□□□□ -0.85
APOBP04114 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC9.72□□□□□ -0.85
APOBP04114 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 BNIP3P13-201ENST00000599968 566 ntBASIC9.72□□□□□ -0.85
APOBP04114 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 AC105020.1-201ENST00000435356 2205 ntBASIC9.72□□□□□ -0.85
APOBP04114 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC9.72□□□□□ -0.85
APOBP04114 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 RCC2P8-201ENST00000502779 1035 ntBASIC9.72□□□□□ -0.85
APOBP04114 AC100850.1-201ENST00000506768 649 ntBASIC9.72□□□□□ -0.85
APOBP04114 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC9.72□□□□□ -0.85
APOBP04114 DNM1P30-201ENST00000563586 452 ntBASIC9.72□□□□□ -0.85
APOBP04114 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC9.72□□□□□ -0.85
APOBP04114 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC9.72□□□□□ -0.85
APOBP04114 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
APOBP04114 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC9.72□□□□□ -0.85
APOBP04114 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC9.72□□□□□ -0.85
APOBP04114 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
APOBP04114 POLL-217ENST00000628479 1953 ntTSL 5 BASIC9.72□□□□□ -0.85
APOBP04114 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 FGFR3P1-201ENST00000449999 601 ntBASIC9.72□□□□□ -0.85
APOBP04114 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC9.72□□□□□ -0.85
APOBP04114 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC9.72□□□□□ -0.85
APOBP04114 AC116345.2-201ENST00000512837 523 ntBASIC9.72□□□□□ -0.85
APOBP04114 EIF5AP2-201ENST00000585668 1047 ntBASIC9.72□□□□□ -0.85
APOBP04114 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC9.72□□□□□ -0.85
APOBP04114 AC007663.3-201ENST00000609632 465 ntBASIC9.72□□□□□ -0.85
APOBP04114 AC100757.4-201ENST00000626934 759 ntBASIC9.72□□□□□ -0.85
APOBP04114 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
APOBP04114 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.71□□□□□ -0.85
APOBP04114 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
APOBP04114 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
APOBP04114 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
APOBP04114 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC9.71□□□□□ -0.85
APOBP04114 SERF2-206ENST00000409291 807 ntTSL 3 BASIC9.71□□□□□ -0.85
APOBP04114 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
APOBP04114 AC104073.2-201ENST00000453737 312 ntBASIC9.71□□□□□ -0.85
APOBP04114 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC9.71□□□□□ -0.85
APOBP04114 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
APOBP04114 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
APOBP04114 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
APOBP04114 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC9.71□□□□□ -0.85
APOBP04114 AC007274.2-201ENST00000421675 662 ntBASIC9.71□□□□□ -0.86
APOBP04114 AC012362.1-201ENST00000434906 739 ntBASIC9.71□□□□□ -0.86
APOBP04114 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC9.71□□□□□ -0.86
APOBP04114 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC9.71□□□□□ -0.86
APOBP04114 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
APOBP04114 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC9.71□□□□□ -0.86
APOBP04114 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
APOBP04114 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
APOBP04114 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
APOBP04114 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
APOBP04114 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
APOBP04114 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC9.71□□□□□ -0.86
APOBP04114 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
APOBP04114 CRCP-204ENST00000398684 492 ntTSL 2 BASIC9.71□□□□□ -0.86
APOBP04114 AC234782.1-201ENST00000451950 919 ntBASIC9.71□□□□□ -0.86
APOBP04114 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC9.71□□□□□ -0.86
APOBP04114 AC019193.1-201ENST00000506678 823 ntBASIC9.71□□□□□ -0.86
APOBP04114 MARK2P5-201ENST00000507649 634 ntBASIC9.71□□□□□ -0.86
APOBP04114 IGHV3-37-201ENST00000518544 340 ntBASIC9.71□□□□□ -0.86
APOBP04114 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC9.71□□□□□ -0.86
APOBP04114 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC9.71□□□□□ -0.86
APOBP04114 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC9.71□□□□□ -0.86
APOBP04114 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
APOBP04114 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
APOBP04114 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
APOBP04114 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC9.71□□□□□ -0.86
APOBP04114 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
APOBP04114 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
APOBP04114 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 IDS-203ENST00000428056 1213 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC9.7□□□□□ -0.86
APOBP04114 AL805961.1-203ENST00000641078 1258 ntBASIC9.7□□□□□ -0.86
APOBP04114 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms