Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRAP01903 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRAP01903 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 RFPL4AP1-201ENST00000530883 850 ntBASIC17.16■□□□□ 0.34
HLA-DRAP01903 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 AC097359.3-201ENST00000603982 1210 ntBASIC17.16■□□□□ 0.34
HLA-DRAP01903 AL033527.5-202ENST00000641632 1098 ntBASIC17.16■□□□□ 0.34
HLA-DRAP01903 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRAP01903 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DRAP01903 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 AL512361.1-201ENST00000554200 418 ntBASIC17.15■□□□□ 0.34
HLA-DRAP01903 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DRAP01903 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRAP01903 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms