Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 TPM3P8-201ENST00000330554 643 ntBASIC17.03■□□□□ 0.32
TIMP1P01033 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TIMP1P01033 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.03■□□□□ 0.32
TIMP1P01033 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 MIR769-201ENST00000390225 118 ntBASIC17.03■□□□□ 0.32
TIMP1P01033 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 ACTBP8-201ENST00000403258 1108 ntBASIC17.03■□□□□ 0.32
TIMP1P01033 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.03■□□□□ 0.32
TIMP1P01033 AC016700.1-201ENST00000429424 312 ntBASIC17.03■□□□□ 0.32
TIMP1P01033 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.03■□□□□ 0.32
TIMP1P01033 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.03■□□□□ 0.32
TIMP1P01033 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TIMP1P01033 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.03■□□□□ 0.32
TIMP1P01033 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.03■□□□□ 0.32
TIMP1P01033 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.03■□□□□ 0.32
TIMP1P01033 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.03■□□□□ 0.32
TIMP1P01033 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.03■□□□□ 0.32
TIMP1P01033 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.03■□□□□ 0.32
TIMP1P01033 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.03■□□□□ 0.32
TIMP1P01033 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.03■□□□□ 0.32
TIMP1P01033 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.02■□□□□ 0.32
TIMP1P01033 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.02■□□□□ 0.32
TIMP1P01033 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
TIMP1P01033 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TIMP1P01033 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMP1P01033 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
TIMP1P01033 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 AC091046.1-201ENST00000331871 207 ntBASIC17.02■□□□□ 0.32
TIMP1P01033 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TIMP1P01033 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMP1P01033 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TIMP1P01033 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TIMP1P01033 AL133466.1-201ENST00000447582 150 ntBASIC17.02■□□□□ 0.32
TIMP1P01033 RN7SL720P-201ENST00000488178 304 ntBASIC17.02■□□□□ 0.32
TIMP1P01033 COX5BP1-201ENST00000507622 393 ntBASIC17.02■□□□□ 0.32
TIMP1P01033 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TIMP1P01033 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TIMP1P01033 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.02■□□□□ 0.32
TIMP1P01033 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.02■□□□□ 0.32
TIMP1P01033 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.02■□□□□ 0.32
TIMP1P01033 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.02■□□□□ 0.32
TIMP1P01033 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.02■□□□□ 0.32
TIMP1P01033 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMP1P01033 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.02■□□□□ 0.32
TIMP1P01033 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 AC138649.2-201ENST00000615886 705 ntBASIC17.02■□□□□ 0.32
TIMP1P01033 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TIMP1P01033 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMP1P01033 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TIMP1P01033 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TIMP1P01033 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TIMP1P01033 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.02■□□□□ 0.31
TIMP1P01033 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TIMP1P01033 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TIMP1P01033 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TIMP1P01033 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.02■□□□□ 0.31
TIMP1P01033 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TIMP1P01033 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TIMP1P01033 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TIMP1P01033 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TIMP1P01033 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 AL023775.1-201ENST00000454907 1746 ntBASIC17.01■□□□□ 0.31
TIMP1P01033 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.01■□□□□ 0.31
TIMP1P01033 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.01■□□□□ 0.31
TIMP1P01033 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.01■□□□□ 0.31
TIMP1P01033 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TIMP1P01033 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.01■□□□□ 0.31
TIMP1P01033 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.01■□□□□ 0.31
TIMP1P01033 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.01■□□□□ 0.31
TIMP1P01033 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.01■□□□□ 0.31
TIMP1P01033 AC114812.1-204ENST00000449669 728 ntBASIC17.01■□□□□ 0.31
TIMP1P01033 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.01■□□□□ 0.31
TIMP1P01033 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.01■□□□□ 0.31
TIMP1P01033 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.01■□□□□ 0.31
TIMP1P01033 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms