Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GGPS1O95749 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GGPS1O95749 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.88■□□□□ 0.45
GGPS1O95749 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.88■□□□□ 0.45
GGPS1O95749 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 GPR53P-205ENST00000457298 1084 ntBASIC17.88■□□□□ 0.45
GGPS1O95749 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.88■□□□□ 0.45
GGPS1O95749 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.88■□□□□ 0.45
GGPS1O95749 AC104596.2-201ENST00000512793 793 ntBASIC17.88■□□□□ 0.45
GGPS1O95749 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GGPS1O95749 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.88■□□□□ 0.45
GGPS1O95749 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.88■□□□□ 0.45
GGPS1O95749 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.88■□□□□ 0.45
GGPS1O95749 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GGPS1O95749 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.88■□□□□ 0.45
GGPS1O95749 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GGPS1O95749 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.88■□□□□ 0.45
GGPS1O95749 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 REXO1L1P-202ENST00000608646 1974 ntBASIC17.88■□□□□ 0.45
GGPS1O95749 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GGPS1O95749 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
GGPS1O95749 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
GGPS1O95749 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 ARSEP1-201ENST00000420443 635 ntBASIC17.87■□□□□ 0.45
GGPS1O95749 ATP5G2P4-201ENST00000442175 420 ntBASIC17.87■□□□□ 0.45
GGPS1O95749 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 PHKG1P2-201ENST00000457537 863 ntBASIC17.87■□□□□ 0.45
GGPS1O95749 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.87■□□□□ 0.45
GGPS1O95749 RN7SL399P-201ENST00000471648 279 ntBASIC17.87■□□□□ 0.45
GGPS1O95749 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.87■□□□□ 0.45
GGPS1O95749 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.87■□□□□ 0.45
GGPS1O95749 HILS1-202ENST00000545329 423 ntBASIC17.87■□□□□ 0.45
GGPS1O95749 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.87■□□□□ 0.45
GGPS1O95749 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
GGPS1O95749 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GGPS1O95749 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.87■□□□□ 0.45
GGPS1O95749 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.87■□□□□ 0.45
GGPS1O95749 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
GGPS1O95749 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GGPS1O95749 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
GGPS1O95749 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 PCDH8P1-201ENST00000428983 2773 ntBASIC17.86■□□□□ 0.45
GGPS1O95749 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GGPS1O95749 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.86■□□□□ 0.45
GGPS1O95749 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 CROCCP1-201ENST00000426910 5675 ntBASIC17.86■□□□□ 0.45
GGPS1O95749 AL391005.1-201ENST00000623953 2435 ntBASIC17.86■□□□□ 0.45
GGPS1O95749 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GGPS1O95749 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GGPS1O95749 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.86■□□□□ 0.45
GGPS1O95749 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.86■□□□□ 0.45
GGPS1O95749 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.86■□□□□ 0.45
GGPS1O95749 TTTY23B-201ENST00000442790 549 ntBASIC17.86■□□□□ 0.45
GGPS1O95749 AC092552.1-201ENST00000547243 906 ntBASIC17.86■□□□□ 0.45
GGPS1O95749 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms