Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
USH2AO75445 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC6.96□□□□□ -1.29
USH2AO75445 AQP7P5-201ENST00000428759 1049 ntBASIC6.96□□□□□ -1.29
USH2AO75445 FAM8A4P-201ENST00000435433 1213 ntBASIC6.96□□□□□ -1.29
USH2AO75445 AQP7P4-201ENST00000447083 1042 ntBASIC6.96□□□□□ -1.29
USH2AO75445 AQP7P2-201ENST00000453967 1041 ntBASIC6.96□□□□□ -1.29
USH2AO75445 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC6.96□□□□□ -1.29
USH2AO75445 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC6.96□□□□□ -1.29
USH2AO75445 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.29
USH2AO75445 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC6.96□□□□□ -1.29
USH2AO75445 AP001002.3-201ENST00000623482 206 ntBASIC6.96□□□□□ -1.29
USH2AO75445 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC6.96□□□□□ -1.29
USH2AO75445 AQP7P3-201ENST00000624547 1041 ntBASIC6.96□□□□□ -1.29
USH2AO75445 NAP1L6-202ENST00000641404 1222 ntBASIC6.96□□□□□ -1.29
USH2AO75445 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
USH2AO75445 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
USH2AO75445 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC6.96□□□□□ -1.29
USH2AO75445 PCDH8P1-201ENST00000428983 2773 ntBASIC6.96□□□□□ -1.29
USH2AO75445 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 CCL25-202ENST00000315626 450 ntTSL 2 BASIC6.96□□□□□ -1.29
USH2AO75445 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.29
USH2AO75445 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC6.96□□□□□ -1.29
USH2AO75445 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC6.96□□□□□ -1.29
USH2AO75445 HNRNPA1P42-201ENST00000458678 957 ntBASIC6.96□□□□□ -1.29
USH2AO75445 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC6.96□□□□□ -1.29
USH2AO75445 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC6.96□□□□□ -1.29
USH2AO75445 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC6.96□□□□□ -1.29
USH2AO75445 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC6.96□□□□□ -1.29
USH2AO75445 AC012044.1-201ENST00000603431 297 ntBASIC6.96□□□□□ -1.29
USH2AO75445 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
USH2AO75445 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
USH2AO75445 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC6.96□□□□□ -1.3
USH2AO75445 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
USH2AO75445 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 AP003680.1-201ENST00000598970 3660 ntBASIC6.96□□□□□ -1.3
USH2AO75445 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
USH2AO75445 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 AC006335.1-201ENST00000445200 547 ntBASIC6.96□□□□□ -1.3
USH2AO75445 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC6.96□□□□□ -1.3
USH2AO75445 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC6.96□□□□□ -1.3
USH2AO75445 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
USH2AO75445 PMEL-214ENST00000550447 901 ntTSL 3 BASIC6.96□□□□□ -1.3
USH2AO75445 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC6.96□□□□□ -1.3
USH2AO75445 ENPP7P14-201ENST00000621765 1040 ntBASIC6.96□□□□□ -1.3
USH2AO75445 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 AL354989.2-201ENST00000435838 1540 ntBASIC6.96□□□□□ -1.3
USH2AO75445 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
USH2AO75445 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 GPAA1P2-202ENST00000606848 1787 ntBASIC6.96□□□□□ -1.3
USH2AO75445 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 IL9RP3-201ENST00000442856 1674 ntBASIC6.96□□□□□ -1.3
USH2AO75445 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC6.96□□□□□ -1.3
USH2AO75445 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC6.96□□□□□ -1.3
USH2AO75445 HCG18-241ENST00000602290 821 ntTSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 AC006548.2-201ENST00000605217 529 ntBASIC6.96□□□□□ -1.3
USH2AO75445 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC6.96□□□□□ -1.3
USH2AO75445 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
USH2AO75445 AL138799.1-201ENST00000448213 1675 ntBASIC6.96□□□□□ -1.3
USH2AO75445 AC116353.5-201ENST00000638148 1699 ntBASIC6.96□□□□□ -1.3
USH2AO75445 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms