Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LRCH4O75427 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LRCH4O75427 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.62■□□□□ 0.25
LRCH4O75427 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 AZGP1P1-201ENST00000411909 902 ntBASIC16.62■□□□□ 0.25
LRCH4O75427 SPDYE17-201ENST00000412399 783 ntBASIC16.62■□□□□ 0.25
LRCH4O75427 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LRCH4O75427 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 DNAJB3-202ENST00000449667 1266 ntBASIC16.62■□□□□ 0.25
LRCH4O75427 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 HNRNPUP1-201ENST00000554987 333 ntBASIC16.62■□□□□ 0.25
LRCH4O75427 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRCH4O75427 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.62■□□□□ 0.25
LRCH4O75427 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.62■□□□□ 0.25
LRCH4O75427 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
LRCH4O75427 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.61■□□□□ 0.25
LRCH4O75427 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.61■□□□□ 0.25
LRCH4O75427 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.61■□□□□ 0.25
LRCH4O75427 AL512356.2-201ENST00000546955 174 ntBASIC16.61■□□□□ 0.25
LRCH4O75427 SNHG9-202ENST00000564014 471 ntBASIC16.61■□□□□ 0.25
LRCH4O75427 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 MIR4453-201ENST00000584019 89 ntBASIC16.61■□□□□ 0.25
LRCH4O75427 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 AC097359.3-201ENST00000603982 1210 ntBASIC16.61■□□□□ 0.25
LRCH4O75427 RN7SL828P-201ENST00000607615 303 ntBASIC16.61■□□□□ 0.25
LRCH4O75427 AL596442.2-201ENST00000610240 980 ntBASIC16.61■□□□□ 0.25
LRCH4O75427 MIR6080-201ENST00000617359 66 ntBASIC16.61■□□□□ 0.25
LRCH4O75427 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.61■□□□□ 0.25
LRCH4O75427 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.61■□□□□ 0.25
LRCH4O75427 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.61■□□□□ 0.25
LRCH4O75427 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH4O75427 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH4O75427 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH4O75427 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRCH4O75427 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH4O75427 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRCH4O75427 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH4O75427 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH4O75427 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRCH4O75427 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.6■□□□□ 0.25
LRCH4O75427 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH4O75427 AL035456.1-201ENST00000456064 1369 ntBASIC16.6■□□□□ 0.25
LRCH4O75427 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH4O75427 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRCH4O75427 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms