Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 RPL37AP1-201ENST00000412502 279 ntBASIC19.71■□□□□ 0.75
SMARCA5O60264 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCA5O60264 EEF1DP4-201ENST00000446006 880 ntBASIC19.71■□□□□ 0.75
SMARCA5O60264 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.71■□□□□ 0.75
SMARCA5O60264 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 AL079307.3-201ENST00000556114 283 ntBASIC19.71■□□□□ 0.75
SMARCA5O60264 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.71■□□□□ 0.75
SMARCA5O60264 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCA5O60264 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCA5O60264 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SMARCA5O60264 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCA5O60264 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SMARCA5O60264 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMARCA5O60264 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCA5O60264 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCA5O60264 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCA5O60264 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SMARCA5O60264 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 SPDYE12P-201ENST00000618416 771 ntBASIC19.7■□□□□ 0.74
SMARCA5O60264 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCA5O60264 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCA5O60264 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCA5O60264 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SMARCA5O60264 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SMARCA5O60264 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCA5O60264 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.69■□□□□ 0.74
SMARCA5O60264 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.69■□□□□ 0.74
SMARCA5O60264 PHKG1P2-201ENST00000457537 863 ntBASIC19.69■□□□□ 0.74
SMARCA5O60264 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.69■□□□□ 0.74
SMARCA5O60264 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 AL589739.1-201ENST00000607720 493 ntBASIC19.69■□□□□ 0.74
SMARCA5O60264 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.69■□□□□ 0.74
SMARCA5O60264 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SMARCA5O60264 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCA5O60264 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCA5O60264 AC136621.1-201ENST00000624017 2304 ntBASIC19.69■□□□□ 0.74
SMARCA5O60264 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SMARCA5O60264 AC073347.1-201ENST00000421633 2643 ntBASIC19.69■□□□□ 0.74
SMARCA5O60264 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCA5O60264 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SMARCA5O60264 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMARCA5O60264 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms