Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 MIR326-201ENST00000362220 95 ntBASIC19.03■□□□□ 0.64
FOXN1O15353 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 AC234644.1-201ENST00000406065 370 ntBASIC19.03■□□□□ 0.64
FOXN1O15353 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN1O15353 ACTG1P3-201ENST00000431775 1114 ntBASIC19.03■□□□□ 0.64
FOXN1O15353 RNA5SP410-201ENST00000516285 106 ntBASIC19.03■□□□□ 0.64
FOXN1O15353 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
FOXN1O15353 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.03■□□□□ 0.64
FOXN1O15353 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.03■□□□□ 0.64
FOXN1O15353 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN1O15353 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
FOXN1O15353 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXN1O15353 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
FOXN1O15353 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
FOXN1O15353 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.02■□□□□ 0.64
FOXN1O15353 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXN1O15353 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXN1O15353 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXN1O15353 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
FOXN1O15353 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN1O15353 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN1O15353 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FOXN1O15353 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
FOXN1O15353 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXN1O15353 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
FOXN1O15353 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXN1O15353 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
FOXN1O15353 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXN1O15353 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN1O15353 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXN1O15353 CICP6-201ENST00000457191 2729 ntBASIC19.01■□□□□ 0.63
FOXN1O15353 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
FOXN1O15353 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms