Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXN3O00409 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXN3O00409 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
FOXN3O00409 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXN3O00409 AC026979.3-201ENST00000607315 403 ntBASIC17.12■□□□□ 0.33
FOXN3O00409 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXN3O00409 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXN3O00409 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FOXN3O00409 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
FOXN3O00409 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXN3O00409 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXN3O00409 AC090616.6-203ENST00000579186 1945 ntBASIC17.11■□□□□ 0.33
FOXN3O00409 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
FOXN3O00409 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 AC009090.5-201ENST00000624886 2285 ntBASIC17.11■□□□□ 0.33
FOXN3O00409 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
FOXN3O00409 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 SPDYE14P-201ENST00000442619 822 ntBASIC17.11■□□□□ 0.33
FOXN3O00409 EEF1DP4-201ENST00000446006 880 ntBASIC17.11■□□□□ 0.33
FOXN3O00409 PHKG1P2-201ENST00000457537 863 ntBASIC17.11■□□□□ 0.33
FOXN3O00409 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.11■□□□□ 0.33
FOXN3O00409 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXN3O00409 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
FOXN3O00409 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXN3O00409 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXN3O00409 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
FOXN3O00409 AC026150.2-201ENST00000564693 1156 ntBASIC17.11■□□□□ 0.33
FOXN3O00409 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
FOXN3O00409 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXN3O00409 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXN3O00409 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXN3O00409 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FOXN3O00409 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
FOXN3O00409 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXN3O00409 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXN3O00409 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FOXN3O00409 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXN3O00409 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
FOXN3O00409 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXN3O00409 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXN3O00409 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXN3O00409 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 DBET-201ENST00000630918 3363 ntBASIC17.1■□□□□ 0.33
FOXN3O00409 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.1■□□□□ 0.33
FOXN3O00409 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXN3O00409 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.1■□□□□ 0.33
FOXN3O00409 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXN3O00409 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 AC105021.1-202ENST00000570572 669 ntBASIC17.1■□□□□ 0.33
FOXN3O00409 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 AL450472.2-201ENST00000603663 1156 ntBASIC17.1■□□□□ 0.33
FOXN3O00409 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXN3O00409 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.1■□□□□ 0.33
FOXN3O00409 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXN3O00409 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXN3O00409 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXN3O00409 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXN3O00409 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms