Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 AL358472.5-202ENST00000641448 1267 ntBASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA3F8WFD2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 AC007541.1-201ENST00000570282 1469 ntBASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 AL592424.1-201ENST00000563624 1536 ntBASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 AL365330.1-201ENST00000607459 531 ntBASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 AC025048.6-201ENST00000634326 1161 ntBASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 AC004840.1-201ENST00000636359 365 ntBASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 MTHFR-217ENST00000641820 1569 ntBASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA3F8WFD2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA3F8WFD2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms