Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SPTLC1P1-201ENST00000447199 261 ntBASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AC135586.1-201ENST00000539323 574 ntBASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 CYP2T1P-202ENST00000641596 2535 ntBASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 AL358472.5-202ENST00000641448 1267 ntBASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA2E9PIF3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA2E9PIF3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 AC007541.1-201ENST00000570282 1469 ntBASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 AL592424.1-201ENST00000563624 1536 ntBASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 AL365330.1-201ENST00000607459 531 ntBASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPA2E9PIF3 AC025048.6-201ENST00000634326 1161 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms