Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 FAM220BP-201ENST00000377689 816 ntBASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 AC241585.1-201ENST00000433527 519 ntBASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 COX20P2-201ENST00000452636 358 ntBASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 SPDYE12P-201ENST00000618416 771 ntBASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 AP001282.1-201ENST00000531301 1499 ntBASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPDC1A2A3K4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 AC011477.6-201ENST00000604980 1927 ntBASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPDC1A2A3K4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 AC002472.2-201ENST00000442739 958 ntBASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 RN7SL204P-201ENST00000582831 262 ntBASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 AC100757.3-201ENST00000622361 1406 ntBASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPDC1A2A3K4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms