Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC006453.4-201ENST00000636949 1252 ntBASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 BX284668.4-201ENST00000453917 508 ntBASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 SCARNA20.5-201ENST00000516991 142 ntBASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 EEF1DP1-201ENST00000585891 896 ntBASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 AL138799.1-201ENST00000448213 1675 ntBASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC015818.8-201ENST00000587907 1519 ntBASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LOC102724428A0A0B4J2F2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 FNTAP2-201ENST00000430308 634 ntBASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LOC102724428A0A0B4J2F2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.04■□□□□ 0.8
LOC102724428A0A0B4J2F2 CD8B2-202ENST00000417670 633 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms