Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 HIST3H2BA-201ENST00000436555 524 ntBASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 AC092337.1-201ENST00000568699 1129 ntBASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 AC079328.2-201ENST00000561241 3354 ntBASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 ALOX12P2-203ENST00000570921 1945 ntBASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 GPR53P-205ENST00000457298 1084 ntBASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 AC099568.2-201ENST00000609194 695 ntBASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CTDP1Q9Y5B0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CTDP1Q9Y5B0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CTDP1Q9Y5B0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 AZGP1P1-201ENST00000411909 902 ntBASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 AL359881.2-201ENST00000602973 570 ntBASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 CLK3P2-201ENST00000427566 1453 ntBASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms