Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 LINC00528-201ENST00000600723 2160 ntBASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 AC108073.2-201ENST00000464002 357 ntBASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 AC145285.3-201ENST00000564603 959 ntBASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.44■□□□□ 0.54
R3HCC1Q9Y3T6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 AC106730.1-201ENST00000566722 1090 ntBASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 TERC-201ENST00000602385 541 ntBASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 AC004790.2-201ENST00000623588 572 ntBASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
R3HCC1Q9Y3T6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 OR2I1P-210ENST00000642037 4691 ntBASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms