Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 RPL13AP20-201ENST00000459725 609 ntBASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AL645728.2-202ENST00000641679 227 ntBASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 LINC02447-202ENST00000501888 2146 ntBASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHANK2Q9UPX8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 RN7SL560P-201ENST00000577943 264 ntBASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 AC010328.2-201ENST00000597698 1111 ntBASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 PRSS30P-206ENST00000641773 873 ntBASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SHANK2Q9UPX8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 KLF2P2-201ENST00000416807 1039 ntBASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 BX539320.1-201ENST00000623759 877 ntBASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AL021578.1-201ENST00000613646 709 ntBASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AC005695.3-201ENST00000614522 232 ntBASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AC145423.3-201ENST00000615987 467 ntBASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHANK2Q9UPX8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
SHANK2Q9UPX8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms