Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 DGCR5-201ENST00000399539 862 ntBASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 INE1-201ENST00000456273 945 ntBASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 POU5F1P6-201ENST00000466990 990 ntBASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 MIR6805-201ENST00000615055 62 ntBASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZRN3Q9UPQ7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 LINC00554-201ENST00000564841 3011 ntBASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 RPS2P32-201ENST00000439199 892 ntBASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 ACA64.2-201ENST00000459014 129 ntBASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 AL079307.3-201ENST00000556114 283 ntBASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 AL133215.2-201ENST00000609242 977 ntBASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN3Q9UPQ7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 AL080243.2-201ENST00000418783 582 ntBASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 CROCCP1-201ENST00000426910 5675 ntBASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN3Q9UPQ7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms