Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 AC105233.2-201ENST00000523697 349 ntBASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 AF228730.5-201ENST00000530288 346 ntBASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 AC007950.2-201ENST00000615045 2347 ntBASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 AC092865.6-201ENST00000642101 219 ntBASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 AC144831.1-201ENST00000573312 2656 ntBASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 AC079781.5-202ENST00000641784 3743 ntBASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LINC00474Q9P2X8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 GGT4P-201ENST00000623672 1708 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 ELL2P1-201ENST00000413990 1906 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC024909.3-201ENST00000611513 2257 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 KRT18P13-201ENST00000400056 1290 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 TFAMP1-201ENST00000412727 736 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 PRYP6-201ENST00000514804 343 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC024267.1-201ENST00000582320 895 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC026120.1-201ENST00000611536 926 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC008267.7-201ENST00000624570 1194 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC016027.1-202ENST00000607927 1699 ntBASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00474Q9P2X8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms