Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 AC024267.1-201ENST00000582320 895 ntBASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 BX640515.1-201ENST00000617215 977 ntBASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 MED15P5-201ENST00000423150 992 ntBASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AL591424.1-201ENST00000442569 1213 ntBASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AC027601.4-201ENST00000611259 610 ntBASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AC087481.3-201ENST00000602886 1894 ntBASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 AKAP8P1-201ENST00000434743 1349 ntBASIC15.43■□□□□ 0.06
LRTM1Q9HBL6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 AP000347.1-202ENST00000435868 847 ntBASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 KRT18P3-201ENST00000451602 1288 ntBASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 AC243562.2-201ENST00000561247 970 ntBASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 AC061975.2-201ENST00000581722 295 ntBASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 AC140113.2-201ENST00000604370 208 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms