Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.17■□□□□ 0.18
VPS11Q9H270 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS11Q9H270 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
VPS11Q9H270 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 VN2R19P-201ENST00000442399 1052 ntBASIC16.16■□□□□ 0.18
VPS11Q9H270 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 AC079781.3-201ENST00000449110 356 ntBASIC16.16■□□□□ 0.18
VPS11Q9H270 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 AL049840.3-201ENST00000602669 611 ntBASIC16.16■□□□□ 0.18
VPS11Q9H270 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS11Q9H270 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS11Q9H270 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VPS11Q9H270 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS11Q9H270 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS11Q9H270 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VPS11Q9H270 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VPS11Q9H270 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS11Q9H270 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 CICP24-201ENST00000605464 2705 ntBASIC16.15■□□□□ 0.18
VPS11Q9H270 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
VPS11Q9H270 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.15■□□□□ 0.18
VPS11Q9H270 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 AC098831.1-202ENST00000438821 336 ntBASIC16.15■□□□□ 0.18
VPS11Q9H270 KRT18P34-201ENST00000488218 1270 ntBASIC16.15■□□□□ 0.18
VPS11Q9H270 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.15■□□□□ 0.18
VPS11Q9H270 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS11Q9H270 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS11Q9H270 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS11Q9H270 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS11Q9H270 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VPS11Q9H270 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS11Q9H270 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
VPS11Q9H270 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS11Q9H270 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
VPS11Q9H270 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.14■□□□□ 0.18
VPS11Q9H270 PCDHA3-202ENST00000532566 4594 ntBASIC16.14■□□□□ 0.18
VPS11Q9H270 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.14■□□□□ 0.18
VPS11Q9H270 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
VPS11Q9H270 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms