Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 AC246785.2-201ENST00000432512 513 ntBASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 AC087163.2-201ENST00000457299 853 ntBASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 AL355075.4-201ENST00000554988 638 ntBASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 AC073592.4-201ENST00000623827 446 ntBASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 INTS4P1-203ENST00000641008 3683 ntBASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLIRPQ9GZT3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 AP001350.2-201ENST00000625104 1094 ntBASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 INTS4P1-201ENST00000438455 1935 ntBASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 AL356585.2-201ENST00000625078 2396 ntBASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms