Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AL355385.1-201ENST00000606123 409 ntBASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 AL844908.2-201ENST00000609461 460 ntBASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 AC074044.1-201ENST00000609673 707 ntBASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM62Q9BVG3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 AC022144.1-201ENST00000602255 1580 ntBASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 AC009477.1-201ENST00000452936 217 ntBASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 AL512361.1-201ENST00000554200 418 ntBASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 AJ011932.1-201ENST00000621707 465 ntBASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 PKD1P5-201ENST00000532415 10291 ntBASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM62Q9BVG3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 Z97205.2-201ENST00000564697 1639 ntBASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 FLJ16779-201ENST00000612722 7638 ntBASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms