Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 KRT18P67-201ENST00000432816 1264 ntBASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 AP002490.2-201ENST00000524791 560 ntBASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 AC109462.3-201ENST00000573934 613 ntBASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 AC011467.2-201ENST00000598425 242 ntBASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 Z82170.1-201ENST00000625081 3192 ntBASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 ST20-AS1-201ENST00000560255 4223 ntBASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AL049757.1-201ENST00000616842 1596 ntBASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 MRPL3P1-201ENST00000400109 1033 ntBASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 MTDHP3-201ENST00000594186 672 ntBASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AC120114.3-201ENST00000611923 658 ntBASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AL355877.3-201ENST00000622820 899 ntBASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms