Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AC087386.2-201ENST00000623212 4637 ntBASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 DBET-201ENST00000630918 3363 ntBASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AC026396.1-201ENST00000419388 421 ntBASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AC023141.13-201ENST00000604991 943 ntBASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AC021097.1-201ENST00000607902 574 ntBASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CHRDL1Q9BU40 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 PMS2P4-201ENST00000412466 1052 ntBASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 KRT18P2-201ENST00000447938 1258 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms