Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 AC104457.1-201ENST00000401024 814 ntBASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 CNN2P8-201ENST00000421872 913 ntBASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 AP001582.1-201ENST00000525856 295 ntBASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 AC009542.2-202ENST00000619004 1067 ntBASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 AC010491.1-201ENST00000563101 2797 ntBASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 AC084018.2-201ENST00000613093 2607 ntBASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 DUX4L45-201ENST00000566406 1057 ntBASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 RHOXF1P1-202ENST00000635473 501 ntBASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP2Q96SN8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 AL513523.2-202ENST00000427283 2040 ntBASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 AP003171.2-201ENST00000528208 925 ntBASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 LTB4R2-202ENST00000528054 3092 ntBASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP2Q96SN8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 AC099398.1-201ENST00000567919 2776 ntBASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 AC084364.1-201ENST00000551967 1556 ntBASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms