Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC134407.2-201ENST00000625089 1978 ntBASIC17.05■□□□□ 0.32
ALPK3Q96L96 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALPK3Q96L96 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ALPK3Q96L96 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
ALPK3Q96L96 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
ALPK3Q96L96 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ALPK3Q96L96 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.04■□□□□ 0.32
ALPK3Q96L96 AL008707.1-201ENST00000422498 534 ntBASIC17.04■□□□□ 0.32
ALPK3Q96L96 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 AC141586.1-203ENST00000567242 366 ntBASIC17.04■□□□□ 0.32
ALPK3Q96L96 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ALPK3Q96L96 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALPK3Q96L96 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 IGHV3-37-201ENST00000518544 340 ntBASIC17.03■□□□□ 0.32
ALPK3Q96L96 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 AC100757.4-201ENST00000626934 759 ntBASIC17.03■□□□□ 0.32
ALPK3Q96L96 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.03■□□□□ 0.32
ALPK3Q96L96 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALPK3Q96L96 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 DPM3-202ENST00000368399 517 ntBASIC17.02■□□□□ 0.32
ALPK3Q96L96 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 MIR1227-201ENST00000408484 88 ntBASIC17.02■□□□□ 0.32
ALPK3Q96L96 EIF3FP3-201ENST00000434851 1086 ntBASIC17.02■□□□□ 0.32
ALPK3Q96L96 RNMTL1P1-201ENST00000454103 560 ntBASIC17.02■□□□□ 0.32
ALPK3Q96L96 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALPK3Q96L96 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
ALPK3Q96L96 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.02■□□□□ 0.31
ALPK3Q96L96 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALPK3Q96L96 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ALPK3Q96L96 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ALPK3Q96L96 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALPK3Q96L96 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ALPK3Q96L96 LINC01144-201ENST00000626198 1710 ntBASIC17.02■□□□□ 0.31
ALPK3Q96L96 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms