Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 AC023141.5-201ENST00000458585 616 ntBASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 RN7SL828P-201ENST00000607615 303 ntBASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 AC136621.1-201ENST00000624017 2304 ntBASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AC023824.1-201ENST00000562945 2975 ntBASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AC013268.4-201ENST00000637413 2228 ntBASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PDLIM5Q96HC4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 AC092127.1-201ENST00000567093 3455 ntBASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 AC073347.1-201ENST00000421633 2643 ntBASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms