Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IFT43Q96FT9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
IFT43Q96FT9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 KRT18P32-201ENST00000424695 1287 ntBASIC16.57■□□□□ 0.24
IFT43Q96FT9 CNN2P2-201ENST00000443536 909 ntBASIC16.57■□□□□ 0.24
IFT43Q96FT9 CNN2P3-201ENST00000450201 906 ntBASIC16.57■□□□□ 0.24
IFT43Q96FT9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 AL136317.3-201ENST00000618497 906 ntBASIC16.57■□□□□ 0.24
IFT43Q96FT9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IFT43Q96FT9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IFT43Q96FT9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 FAM45BP-202ENST00000592932 1624 ntBASIC16.56■□□□□ 0.24
IFT43Q96FT9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 AL592424.1-201ENST00000563624 1536 ntBASIC16.56■□□□□ 0.24
IFT43Q96FT9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.56■□□□□ 0.24
IFT43Q96FT9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IFT43Q96FT9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.56■□□□□ 0.24
IFT43Q96FT9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms