Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC098859.1-201ENST00000502915 1238 ntBASIC15.51■□□□□ 0.07
RNF31Q96EP0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 AC005225.4-201ENST00000557330 545 ntBASIC15.51■□□□□ 0.07
RNF31Q96EP0 AC104794.3-201ENST00000566840 1248 ntBASIC15.51■□□□□ 0.07
RNF31Q96EP0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 AL133215.2-201ENST00000609242 977 ntBASIC15.51■□□□□ 0.07
RNF31Q96EP0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RNF31Q96EP0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF31Q96EP0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 FAM220BP-201ENST00000377689 816 ntBASIC15.5■□□□□ 0.07
RNF31Q96EP0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 FAM207CP-201ENST00000443486 507 ntBASIC15.5■□□□□ 0.07
RNF31Q96EP0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 AL662799.1-202ENST00000614205 422 ntBASIC15.5■□□□□ 0.07
RNF31Q96EP0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 AL136379.1-201ENST00000623471 2642 ntBASIC15.5■□□□□ 0.07
RNF31Q96EP0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 ALOX12P2-203ENST00000570921 1945 ntBASIC15.5■□□□□ 0.07
RNF31Q96EP0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF31Q96EP0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF31Q96EP0 AC063926.3-201ENST00000624734 5658 ntBASIC15.5■□□□□ 0.07
RNF31Q96EP0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 AC093724.1-201ENST00000448659 1027 ntBASIC15.49■□□□□ 0.07
RNF31Q96EP0 RN7SL692P-201ENST00000464677 288 ntBASIC15.49■□□□□ 0.07
RNF31Q96EP0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 AL512361.1-201ENST00000554200 418 ntBASIC15.49■□□□□ 0.07
RNF31Q96EP0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 AL079307.3-201ENST00000556114 283 ntBASIC15.49■□□□□ 0.07
RNF31Q96EP0 AC044860.1-202ENST00000559481 777 ntBASIC15.49■□□□□ 0.07
RNF31Q96EP0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms