Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 GRK6P1-201ENST00000400595 1711 ntBASIC14.27□□□□□ -0.12
RFT1Q96AA3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RFT1Q96AA3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.27□□□□□ -0.12
RFT1Q96AA3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 AC107918.4-202ENST00000641623 219 ntBASIC14.27□□□□□ -0.13
RFT1Q96AA3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 CICP4-201ENST00000447359 2812 ntBASIC14.27□□□□□ -0.13
RFT1Q96AA3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RFT1Q96AA3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.27□□□□□ -0.13
RFT1Q96AA3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 OR7E14P-202ENST00000530490 1290 ntBASIC14.26□□□□□ -0.13
RFT1Q96AA3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 CLEC4GP1-201ENST00000596555 870 ntBASIC14.26□□□□□ -0.13
RFT1Q96AA3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 AC104581.4-201ENST00000623126 3052 ntBASIC14.26□□□□□ -0.13
RFT1Q96AA3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.26□□□□□ -0.13
RFT1Q96AA3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFT1Q96AA3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.26□□□□□ -0.13
RFT1Q96AA3 AP003680.1-201ENST00000598970 3660 ntBASIC14.26□□□□□ -0.13
RFT1Q96AA3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 AL353732.1-201ENST00000569618 1459 ntBASIC14.25□□□□□ -0.13
RFT1Q96AA3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms