Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 AC005357.2-202ENST00000590507 1060 ntBASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 AC012044.1-201ENST00000603431 297 ntBASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 RN7SL818P-201ENST00000485099 259 ntBASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 RTN3P1-201ENST00000536295 711 ntBASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 RN7SL725P-201ENST00000606439 259 ntBASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 AP001065.2-201ENST00000617205 644 ntBASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 AC051619.9-201ENST00000623237 597 ntBASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 AL805961.1-201ENST00000642026 753 ntBASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
COL22A1Q8NFW1 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.77■□□□□ 0.91
COL22A1Q8NFW1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COL22A1Q8NFW1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 IGLV3-15-201ENST00000518356 244 ntBASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 AC090164.2-201ENST00000611487 516 ntBASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.76■□□□□ 0.91
COL22A1Q8NFW1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 AC009955.4-201ENST00000597192 544 ntBASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 AC103691.2-201ENST00000618824 433 ntBASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 AL645937.2-201ENST00000396808 931 ntBASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC20.75■□□□□ 0.91
COL22A1Q8NFW1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC005915.1-201ENST00000624912 2018 ntBASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC022188.1-201ENST00000620960 1664 ntBASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms