Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.02□□□□□ -0.48
NUP35Q8NFH5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NUP35Q8NFH5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 AC140479.7-201ENST00000636301 2332 ntBASIC12.02□□□□□ -0.49
NUP35Q8NFH5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 YBX1P2-201ENST00000489612 999 ntBASIC12.02□□□□□ -0.49
NUP35Q8NFH5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 MIR4497-201ENST00000583208 89 ntBASIC12.02□□□□□ -0.49
NUP35Q8NFH5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 AC139887.4-201ENST00000607877 719 ntBASIC12.02□□□□□ -0.49
NUP35Q8NFH5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 AC006504.5-208ENST00000588784 2401 ntBASIC12.02□□□□□ -0.49
NUP35Q8NFH5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NUP35Q8NFH5 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.01□□□□□ -0.49
NUP35Q8NFH5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.01□□□□□ -0.49
NUP35Q8NFH5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC009090.5-201ENST00000624886 2285 ntBASIC12.01□□□□□ -0.49
NUP35Q8NFH5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC091607.1-201ENST00000490318 1060 ntBASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC087641.1-201ENST00000557561 1021 ntBASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC010331.1-201ENST00000611423 582 ntBASIC12.01□□□□□ -0.49
NUP35Q8NFH5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC073592.4-201ENST00000623827 446 ntBASIC12.01□□□□□ -0.49
NUP35Q8NFH5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms