Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PKD1P6-201ENST00000343738 4769 ntBASIC21.69■■□□□ 1.06
XRN1Q8IZH2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
XRN1Q8IZH2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 MIR769-201ENST00000390225 118 ntBASIC21.68■■□□□ 1.06
XRN1Q8IZH2 RN7SL11P-201ENST00000471305 293 ntBASIC21.68■■□□□ 1.06
XRN1Q8IZH2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 MIR5572-201ENST00000583188 137 ntBASIC21.68■■□□□ 1.06
XRN1Q8IZH2 AP000346.4-201ENST00000614827 381 ntBASIC21.68■■□□□ 1.06
XRN1Q8IZH2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.68■■□□□ 1.06
XRN1Q8IZH2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.67■■□□□ 1.06
XRN1Q8IZH2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 AP001002.3-201ENST00000623482 206 ntBASIC21.67■■□□□ 1.06
XRN1Q8IZH2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRN1Q8IZH2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 AC244157.2-201ENST00000616239 1006 ntBASIC21.66■■□□□ 1.06
XRN1Q8IZH2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 COX5BP1-201ENST00000507622 393 ntBASIC21.66■■□□□ 1.06
XRN1Q8IZH2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 AC134698.3-201ENST00000523880 214 ntBASIC21.66■■□□□ 1.06
XRN1Q8IZH2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XRN1Q8IZH2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 AC006449.6-201ENST00000612330 2296 ntBASIC21.65■■□□□ 1.06
XRN1Q8IZH2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 AC026740.1-201ENST00000607068 791 ntBASIC21.65■■□□□ 1.06
XRN1Q8IZH2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 AC091544.8-201ENST00000619490 361 ntBASIC21.65■■□□□ 1.06
XRN1Q8IZH2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms