Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC123567.1-201ENST00000548294 1261 ntBASIC16.3■□□□□ 0.2
CHPFQ8IZ52 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 AC132938.2-201ENST00000579188 680 ntBASIC16.3■□□□□ 0.2
CHPFQ8IZ52 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 AC025048.3-201ENST00000590609 569 ntBASIC16.3■□□□□ 0.2
CHPFQ8IZ52 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 AC005702.4-201ENST00000618393 416 ntBASIC16.3■□□□□ 0.2
CHPFQ8IZ52 AL591163.1-201ENST00000641757 987 ntBASIC16.3■□□□□ 0.2
CHPFQ8IZ52 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AC099568.2-201ENST00000609194 695 ntBASIC16.29■□□□□ 0.2
CHPFQ8IZ52 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHPFQ8IZ52 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 AC092337.1-201ENST00000568699 1129 ntBASIC16.28■□□□□ 0.2
CHPFQ8IZ52 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 AC093726.1-201ENST00000608064 963 ntBASIC16.28■□□□□ 0.2
CHPFQ8IZ52 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHPFQ8IZ52 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHPFQ8IZ52 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
CHPFQ8IZ52 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.27■□□□□ 0.2
CHPFQ8IZ52 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.27■□□□□ 0.2
CHPFQ8IZ52 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.27■□□□□ 0.2
CHPFQ8IZ52 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms