Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 OR7E14P-202ENST00000530490 1290 ntBASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 AP002469.2-201ENST00000531724 424 ntBASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 AC091304.2-201ENST00000564639 760 ntBASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 MIR3652-201ENST00000579335 131 ntBASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 ACTL9-202ENST00000612068 1252 ntBASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 MIR1199-201ENST00000621445 119 ntBASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 AC106881.1-201ENST00000605849 3329 ntBASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 RPS2P1-201ENST00000434010 821 ntBASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 OR7E47P-204ENST00000575924 449 ntBASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUDCD3Q8IVD9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NUDCD3Q8IVD9 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.96■□□□□ 0.14
NUDCD3Q8IVD9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
NUDCD3Q8IVD9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NUDCD3Q8IVD9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NUDCD3Q8IVD9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NUDCD3Q8IVD9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
NUDCD3Q8IVD9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NUDCD3Q8IVD9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms