Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 HCG4-201ENST00000418983 998 ntBASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 MED15P5-201ENST00000423150 992 ntBASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 AC009947.1-201ENST00000444350 727 ntBASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 AC008677.1-201ENST00000519230 1561 ntBASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
CRLF3Q8IUI8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 SLC25A6P2-201ENST00000497974 877 ntBASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 AC005412.3-201ENST00000580309 715 ntBASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 FAM197Y3-203ENST00000618346 717 ntBASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 AC087481.3-201ENST00000602886 1894 ntBASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.08■□□□□ 0.16
CRLF3Q8IUI8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms