Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL23A1Q86Y22 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL23A1Q86Y22 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 EEF1DP6-201ENST00000449232 372 ntBASIC19.76■□□□□ 0.75
COL23A1Q86Y22 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 AP003419.4-201ENST00000616071 517 ntBASIC19.76■□□□□ 0.75
COL23A1Q86Y22 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.76■□□□□ 0.75
COL23A1Q86Y22 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 AC069218.1-201ENST00000435269 762 ntBASIC19.75■□□□□ 0.75
COL23A1Q86Y22 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.75■□□□□ 0.75
COL23A1Q86Y22 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 ACTBP8-201ENST00000403258 1108 ntBASIC19.74■□□□□ 0.75
COL23A1Q86Y22 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.74■□□□□ 0.75
COL23A1Q86Y22 RN7SL11P-201ENST00000471305 293 ntBASIC19.74■□□□□ 0.75
COL23A1Q86Y22 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 BX539320.1-201ENST00000623759 877 ntBASIC19.74■□□□□ 0.75
COL23A1Q86Y22 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.74■□□□□ 0.75
COL23A1Q86Y22 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 AP001282.1-201ENST00000531301 1499 ntBASIC19.73■□□□□ 0.75
COL23A1Q86Y22 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 TPM3P8-201ENST00000330554 643 ntBASIC19.73■□□□□ 0.75
COL23A1Q86Y22 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.73■□□□□ 0.75
COL23A1Q86Y22 AC079178.1-201ENST00000420915 656 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms