Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 MTHFR-217ENST00000641820 1569 ntBASIC20.06■□□□□ 0.8
COPS6Q7L5N1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS6Q7L5N1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 AC133539.2-201ENST00000604757 467 ntBASIC20.05■□□□□ 0.8
COPS6Q7L5N1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.05■□□□□ 0.8
COPS6Q7L5N1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS6Q7L5N1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 KRT8P22-201ENST00000562317 1415 ntBASIC20.04■□□□□ 0.8
COPS6Q7L5N1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 AL512343.1-201ENST00000605837 169 ntBASIC20.04■□□□□ 0.8
COPS6Q7L5N1 AC017083.2-201ENST00000608069 979 ntBASIC20.04■□□□□ 0.8
COPS6Q7L5N1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
COPS6Q7L5N1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS6Q7L5N1 MIR4313-201ENST00000580760 101 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms