Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 IGLL3P-201ENST00000412472 434 ntBASIC14.87□□□□□ -0.03
TUBA1AQ71U36 KRT18P2-201ENST00000447938 1258 ntBASIC14.87□□□□□ -0.03
TUBA1AQ71U36 KRT18P3-201ENST00000451602 1288 ntBASIC14.87□□□□□ -0.03
TUBA1AQ71U36 KRT18P58-201ENST00000527480 1120 ntBASIC14.87□□□□□ -0.03
TUBA1AQ71U36 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 AC013467.2-201ENST00000605472 835 ntBASIC14.87□□□□□ -0.03
TUBA1AQ71U36 AC027601.4-201ENST00000611259 610 ntBASIC14.87□□□□□ -0.03
TUBA1AQ71U36 AC010654.1-201ENST00000615722 808 ntBASIC14.87□□□□□ -0.03
TUBA1AQ71U36 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1AQ71U36 CICP24-201ENST00000605464 2705 ntBASIC14.86□□□□□ -0.03
TUBA1AQ71U36 AC020658.6-201ENST00000623564 1870 ntBASIC14.86□□□□□ -0.03
TUBA1AQ71U36 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 AC069224.1-201ENST00000566372 1715 ntBASIC14.86□□□□□ -0.03
TUBA1AQ71U36 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.86□□□□□ -0.03
TUBA1AQ71U36 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1AQ71U36 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms