Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 ELL2P1-201ENST00000413990 1906 ntBASIC18.04■□□□□ 0.48
SHC4Q6S5L8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 C18orf15-201ENST00000623680 2534 ntBASIC18.04■□□□□ 0.48
SHC4Q6S5L8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 AL139010.1-201ENST00000454878 894 ntBASIC18.04■□□□□ 0.48
SHC4Q6S5L8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 RARRES2P9-201ENST00000565168 469 ntBASIC18.04■□□□□ 0.48
SHC4Q6S5L8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 AC022145.2-201ENST00000598203 171 ntBASIC18.04■□□□□ 0.48
SHC4Q6S5L8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 KRT8P37-201ENST00000451609 1420 ntBASIC18.04■□□□□ 0.48
SHC4Q6S5L8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.03■□□□□ 0.48
SHC4Q6S5L8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 AC127383.1-201ENST00000444697 1800 ntBASIC18.03■□□□□ 0.48
SHC4Q6S5L8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC4Q6S5L8 AC006058.4-201ENST00000624016 1670 ntBASIC18.03■□□□□ 0.48
SHC4Q6S5L8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 FAM58DP-201ENST00000428076 619 ntBASIC18.02■□□□□ 0.48
SHC4Q6S5L8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 BANF1P1-201ENST00000553684 263 ntBASIC18.02■□□□□ 0.48
SHC4Q6S5L8 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 AC093520.2-201ENST00000561830 333 ntBASIC18.02■□□□□ 0.48
SHC4Q6S5L8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC4Q6S5L8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms