Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 AC100757.3-201ENST00000622361 1406 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 AC126177.1-201ENST00000547829 2218 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 RPL37AP1-201ENST00000412502 279 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 FAM8A3P-201ENST00000427218 844 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 UGT1A2P-201ENST00000454886 866 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 RNA5SP421-201ENST00000516864 134 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 AL365330.1-201ENST00000607459 531 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 AL590560.3-201ENST00000623350 461 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 CETN4P-206ENST00000642099 2168 ntBASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RFWD3Q6PCD5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 AC241585.1-201ENST00000433527 519 ntBASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 HLA-V-204ENST00000476601 1289 ntBASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD3Q6PCD5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RFWD3Q6PCD5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
RFWD3Q6PCD5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFWD3Q6PCD5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFWD3Q6PCD5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RFWD3Q6PCD5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms