Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 AC074386.1-202ENST00000463561 864 ntBASIC16.4■□□□□ 0.22
CASC4Q6P4E1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASC4Q6P4E1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 ZNF259P1-201ENST00000407656 1365 ntBASIC16.39■□□□□ 0.21
CASC4Q6P4E1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 AL590627.1-203ENST00000421194 1026 ntBASIC16.39■□□□□ 0.21
CASC4Q6P4E1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 PDPK2P-202ENST00000562415 1191 ntBASIC16.39■□□□□ 0.21
CASC4Q6P4E1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASC4Q6P4E1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms