Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.61■□□□□ 0.73
DDR1Q08345 AL451050.2-201ENST00000606967 682 ntBASIC19.61■□□□□ 0.73
DDR1Q08345 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.61■□□□□ 0.73
DDR1Q08345 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.61■□□□□ 0.73
DDR1Q08345 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DDR1Q08345 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.61■□□□□ 0.73
DDR1Q08345 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
DDR1Q08345 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.6■□□□□ 0.73
DDR1Q08345 AC018892.3-201ENST00000623986 2499 ntBASIC19.6■□□□□ 0.73
DDR1Q08345 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DDR1Q08345 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.6■□□□□ 0.73
DDR1Q08345 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.6■□□□□ 0.73
DDR1Q08345 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.6■□□□□ 0.73
DDR1Q08345 KRT18P25-201ENST00000508931 1278 ntBASIC19.6■□□□□ 0.73
DDR1Q08345 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.6■□□□□ 0.73
DDR1Q08345 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DDR1Q08345 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
DDR1Q08345 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.6■□□□□ 0.73
DDR1Q08345 MIR6727-201ENST00000620702 65 ntBASIC19.6■□□□□ 0.73
DDR1Q08345 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.6■□□□□ 0.73
DDR1Q08345 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DDR1Q08345 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDR1Q08345 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
DDR1Q08345 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DDR1Q08345 AL645608.8-201ENST00000606034 2086 ntBASIC19.6■□□□□ 0.73
DDR1Q08345 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.59■□□□□ 0.73
DDR1Q08345 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
DDR1Q08345 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DDR1Q08345 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.59■□□□□ 0.73
DDR1Q08345 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.59■□□□□ 0.73
DDR1Q08345 MIR3619-201ENST00000579667 83 ntBASIC19.59■□□□□ 0.73
DDR1Q08345 MIR4706-201ENST00000582134 82 ntBASIC19.59■□□□□ 0.73
DDR1Q08345 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.59■□□□□ 0.73
DDR1Q08345 ECM1P1-201ENST00000604092 1279 ntBASIC19.59■□□□□ 0.73
DDR1Q08345 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
DDR1Q08345 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
DDR1Q08345 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 KRT8P19-201ENST00000551916 1455 ntBASIC19.59■□□□□ 0.73
DDR1Q08345 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.59■□□□□ 0.73
DDR1Q08345 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.59■□□□□ 0.73
DDR1Q08345 AC106820.2-201ENST00000563775 3264 ntBASIC19.59■□□□□ 0.73
DDR1Q08345 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.59■□□□□ 0.73
DDR1Q08345 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.59■□□□□ 0.73
DDR1Q08345 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDR1Q08345 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.59■□□□□ 0.73
DDR1Q08345 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DDR1Q08345 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDR1Q08345 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.58■□□□□ 0.73
DDR1Q08345 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDR1Q08345 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDR1Q08345 AC099398.1-201ENST00000567919 2776 ntBASIC19.58■□□□□ 0.73
DDR1Q08345 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.58■□□□□ 0.73
DDR1Q08345 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DDR1Q08345 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.58■□□□□ 0.73
DDR1Q08345 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDR1Q08345 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
DDR1Q08345 HINT2P1-201ENST00000419438 481 ntBASIC19.58■□□□□ 0.72
DDR1Q08345 NUS1P3-201ENST00000423502 862 ntBASIC19.58■□□□□ 0.72
DDR1Q08345 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.58■□□□□ 0.72
DDR1Q08345 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.58■□□□□ 0.72
DDR1Q08345 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.58■□□□□ 0.72
DDR1Q08345 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.58■□□□□ 0.72
DDR1Q08345 MIR4722-201ENST00000578292 60 ntBASIC19.58■□□□□ 0.72
DDR1Q08345 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.58■□□□□ 0.72
DDR1Q08345 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.58■□□□□ 0.72
DDR1Q08345 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.58■□□□□ 0.72
DDR1Q08345 AC138627.1-207ENST00000641560 1006 ntBASIC19.58■□□□□ 0.72
DDR1Q08345 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
DDR1Q08345 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.58■□□□□ 0.72
DDR1Q08345 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.58■□□□□ 0.72
DDR1Q08345 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
DDR1Q08345 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDR1Q08345 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.58■□□□□ 0.72
DDR1Q08345 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.58■□□□□ 0.72
DDR1Q08345 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDR1Q08345 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms