Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL16A1Q07092 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL16A1Q07092 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.97■□□□□ 0.95
COL16A1Q07092 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL16A1Q07092 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COL16A1Q07092 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL16A1Q07092 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COL16A1Q07092 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.97■□□□□ 0.95
COL16A1Q07092 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.97■□□□□ 0.95
COL16A1Q07092 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.97■□□□□ 0.95
COL16A1Q07092 AP002803.1-201ENST00000528836 498 ntBASIC20.97■□□□□ 0.95
COL16A1Q07092 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC20.97■□□□□ 0.95
COL16A1Q07092 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC20.97■□□□□ 0.95
COL16A1Q07092 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.97■□□□□ 0.95
COL16A1Q07092 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.97■□□□□ 0.95
COL16A1Q07092 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC20.97■□□□□ 0.95
COL16A1Q07092 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL16A1Q07092 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COL16A1Q07092 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL16A1Q07092 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.97■□□□□ 0.95
COL16A1Q07092 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.97■□□□□ 0.95
COL16A1Q07092 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.97■□□□□ 0.95
COL16A1Q07092 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL16A1Q07092 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL16A1Q07092 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 FOS-204ENST00000554617 796 ntTSL 2 BASIC20.96■□□□□ 0.95
COL16A1Q07092 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC20.96■□□□□ 0.95
COL16A1Q07092 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC20.96■□□□□ 0.95
COL16A1Q07092 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.96■□□□□ 0.95
COL16A1Q07092 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
COL16A1Q07092 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COL16A1Q07092 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
COL16A1Q07092 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.96■□□□□ 0.95
COL16A1Q07092 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
COL16A1Q07092 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.96■□□□□ 0.95
COL16A1Q07092 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
COL16A1Q07092 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.96■□□□□ 0.95
COL16A1Q07092 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC20.96■□□□□ 0.95
COL16A1Q07092 NAGK-204ENST00000443872 878 ntTSL 3 BASIC20.96■□□□□ 0.95
COL16A1Q07092 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
COL16A1Q07092 AC009779.1-201ENST00000551138 283 ntBASIC20.96■□□□□ 0.95
COL16A1Q07092 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
COL16A1Q07092 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.96■□□□□ 0.95
COL16A1Q07092 AP001527.2-201ENST00000614441 631 ntBASIC20.96■□□□□ 0.95
COL16A1Q07092 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.96■□□□□ 0.95
COL16A1Q07092 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.96■□□□□ 0.95
COL16A1Q07092 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.96■□□□□ 0.95
COL16A1Q07092 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL16A1Q07092 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
COL16A1Q07092 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.95■□□□□ 0.94
COL16A1Q07092 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.95■□□□□ 0.94
COL16A1Q07092 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL16A1Q07092 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
COL16A1Q07092 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.95■□□□□ 0.94
COL16A1Q07092 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC20.95■□□□□ 0.94
COL16A1Q07092 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
COL16A1Q07092 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC20.95■□□□□ 0.94
COL16A1Q07092 AC009955.4-201ENST00000597192 544 ntBASIC20.95■□□□□ 0.94
COL16A1Q07092 AP003392.6-201ENST00000607709 325 ntBASIC20.95■□□□□ 0.94
COL16A1Q07092 AL162426.1-201ENST00000624141 743 ntBASIC20.95■□□□□ 0.94
COL16A1Q07092 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.95■□□□□ 0.94
COL16A1Q07092 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 CAP2P1-201ENST00000557743 1390 ntBASIC20.95■□□□□ 0.94
COL16A1Q07092 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
COL16A1Q07092 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL16A1Q07092 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL16A1Q07092 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL16A1Q07092 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL16A1Q07092 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.94■□□□□ 0.94
COL16A1Q07092 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL16A1Q07092 RN7SKP214-201ENST00000364208 315 ntBASIC20.94■□□□□ 0.94
COL16A1Q07092 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms