Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 AKAP8P1-201ENST00000434743 1349 ntBASIC15.46■□□□□ 0.07
HMGCS1Q01581 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 AC020658.6-201ENST00000623564 1870 ntBASIC15.46■□□□□ 0.07
HMGCS1Q01581 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 AC061975.2-201ENST00000581722 295 ntBASIC15.46■□□□□ 0.07
HMGCS1Q01581 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCS1Q01581 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGCS1Q01581 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGCS1Q01581 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
HMGCS1Q01581 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGCS1Q01581 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGCS1Q01581 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGCS1Q01581 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
HMGCS1Q01581 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HMGCS1Q01581 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 AC040169.1-201ENST00000565382 521 ntBASIC15.45■□□□□ 0.06
HMGCS1Q01581 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 AC008267.7-201ENST00000624570 1194 ntBASIC15.45■□□□□ 0.06
HMGCS1Q01581 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
HMGCS1Q01581 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCS1Q01581 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms